HCSGD entry for RPRD1A
1. General information
| Official gene symbol | RPRD1A |
|---|---|
| Entrez ID | 55197 |
| Gene full name | regulation of nuclear pre-mRNA domain containing 1A |
| Other gene symbols | HsT3101 P15RS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016591 | DNA-directed RNA polymerase II, holoenzyme | IDA | cellular_component |
| GO:0070940 | Dephosphorylation of RNA polymerase II C-terminal domain | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0181016033 | 0.9803445006 | 0.3293975812 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3984028989 |
| GSE13712_SHEAR | Up | 0.2758125897 |
| GSE13712_STATIC | Up | 0.0139586474 |
| GSE19018 | Down | -0.2608546561 |
| GSE19899_A1 | Up | 0.5235204750 |
| GSE19899_A2 | Up | 0.3051957347 |
| PubMed_21979375_A1 | Up | 0.7179919854 |
| PubMed_21979375_A2 | Up | 0.2177683124 |
| GSE35957 | Up | 0.1723486833 |
| GSE36640 | Up | 0.2214082004 |
| GSE54402 | Up | 0.6045717636 |
| GSE9593 | Up | 0.0385887542 |
| GSE43922 | Up | 0.3901281170 |
| GSE24585 | Down | -0.2827798262 |
| GSE37065 | Up | 0.2030576178 |
| GSE28863_A1 | Up | 0.2614675204 |
| GSE28863_A2 | Up | 0.3085027793 |
| GSE28863_A3 | Up | 0.2591494866 |
| GSE28863_A4 | Up | 0.1740582557 |
| GSE48662 | Down | -0.2327666136 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020628 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT028472 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-181b-5p | MIMAT0000257 | MIRT047242 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047673 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-20a-5p | MIMAT0000075 | MIRT050478 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
