HCSGD entry for UBR7
1. General information
| Official gene symbol | UBR7 |
|---|---|
| Entrez ID | 55148 |
| Gene full name | ubiquitin protein ligase E3 component n-recognin 7 (putative) |
| Other gene symbols | C14orf130 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0004842 | Ubiquitin-protein ligase activity | IEA | molecular_function |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9014027279 | 0.0075610083 | 0.9999902473 | 0.1736590750 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0698331331 |
| GSE13712_SHEAR | Down | -0.2327731677 |
| GSE13712_STATIC | Down | -0.1051414323 |
| GSE19018 | Down | -2.0439046374 |
| GSE19899_A1 | Down | -0.6888605616 |
| GSE19899_A2 | Down | -1.5118278852 |
| PubMed_21979375_A1 | Down | -0.3723442463 |
| PubMed_21979375_A2 | Down | -0.9249081640 |
| GSE35957 | Down | -1.0077232098 |
| GSE36640 | Down | -1.8068073282 |
| GSE54402 | Down | -0.0445064891 |
| GSE9593 | Down | -0.3828889517 |
| GSE43922 | Up | 0.0380807942 |
| GSE24585 | Up | 0.3834113119 |
| GSE37065 | Up | 0.1338764735 |
| GSE28863_A1 | Up | 0.2145619001 |
| GSE28863_A2 | Up | 0.5156558574 |
| GSE28863_A3 | Down | -0.3517246502 |
| GSE28863_A4 | Up | 0.0816501686 |
| GSE48662 | Down | -0.3266556724 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016395 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039250 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046609 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181c-5p | MIMAT0000258 | MIRT047220 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
