HCSGD entry for RBM23
1. General information
| Official gene symbol | RBM23 |
|---|---|
| Entrez ID | 55147 |
| Gene full name | RNA binding motif protein 23 |
| Other gene symbols | CAPERbeta RNPC4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9923452072 | 0.0147668364 | 0.9999902473 | 0.2394811460 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0996512517 |
| GSE13712_SHEAR | Down | -0.1725237193 |
| GSE13712_STATIC | Down | -0.3055365258 |
| GSE19018 | Down | -0.7624707711 |
| GSE19899_A1 | Down | -0.6514019134 |
| GSE19899_A2 | Down | -0.4207004174 |
| PubMed_21979375_A1 | Down | -0.9597795312 |
| PubMed_21979375_A2 | Down | -0.3384802950 |
| GSE35957 | Down | -0.2186348769 |
| GSE36640 | Down | -0.8103946575 |
| GSE54402 | Down | -0.1667498960 |
| GSE9593 | Down | -0.1514815256 |
| GSE43922 | Down | -0.2368366301 |
| GSE24585 | Up | 0.0589715448 |
| GSE37065 | Up | 0.1496539032 |
| GSE28863_A1 | Up | 0.1153924142 |
| GSE28863_A2 | Down | -0.1168665899 |
| GSE28863_A3 | Down | -0.6121228751 |
| GSE28863_A4 | Up | 0.0292954843 |
| GSE48662 | Up | 0.0335820078 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-93-5p | MIMAT0000093 | MIRT048779 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
