HCSGD entry for LARP1B
1. General information
| Official gene symbol | LARP1B |
|---|---|
| Entrez ID | 55132 |
| Gene full name | La ribonucleoprotein domain family, member 1B |
| Other gene symbols | LARP2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0019013 | Viral nucleocapsid | IEA | cellular_component |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8112263668 | 0.6290628776 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0724100431 |
| GSE13712_SHEAR | Up | 0.0952595382 |
| GSE13712_STATIC | Up | 0.0871378359 |
| GSE19018 | Up | 0.0286409057 |
| GSE19899_A1 | Up | 0.1303865954 |
| GSE19899_A2 | Up | 0.2118919736 |
| PubMed_21979375_A1 | Up | 0.3419874893 |
| PubMed_21979375_A2 | Down | -0.1420312667 |
| GSE35957 | Up | 0.3036608521 |
| GSE36640 | Down | -0.1387542330 |
| GSE54402 | Down | -0.1215704631 |
| GSE9593 | Down | -0.1996864025 |
| GSE43922 | Down | -0.0441575310 |
| GSE24585 | Up | 0.0852850211 |
| GSE37065 | Down | -0.0619052790 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.2982341553 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024765 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026553 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-423-3p | MIMAT0001340 | MIRT042508 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
