HCSGD entry for PARPBP
1. General information
| Official gene symbol | PARPBP |
|---|---|
| Entrez ID | 55010 |
| Gene full name | PARP1 binding protein |
| Other gene symbols | AROM C12orf48 PARI |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000785 | Chromatin | IDA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006281 | DNA repair | IEA | biological_process |
| GO:2000042 | Negative regulation of double-strand break repair via homologous recombination | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9670461533 | 0.0010042780 | 0.9999902473 | 0.0598475113 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3727885827 |
| GSE13712_SHEAR | Down | -0.1815510352 |
| GSE13712_STATIC | Down | -0.4309541132 |
| GSE19018 | Up | 0.0751154778 |
| GSE19899_A1 | Down | -0.0757050309 |
| GSE19899_A2 | Down | -2.5229942629 |
| PubMed_21979375_A1 | Down | -1.0104748711 |
| PubMed_21979375_A2 | Down | -2.4090244707 |
| GSE35957 | Down | -1.0734981923 |
| GSE36640 | Down | -2.2041933506 |
| GSE54402 | Down | -0.7309487702 |
| GSE9593 | Down | -0.8464363779 |
| GSE43922 | Down | -1.0207062992 |
| GSE24585 | Down | -0.3942115392 |
| GSE37065 | Down | -0.1457148769 |
| GSE28863_A1 | Down | -0.0207211192 |
| GSE28863_A2 | Up | 0.7839456308 |
| GSE28863_A3 | Down | -0.5711014882 |
| GSE28863_A4 | Up | 0.3108614509 |
| GSE48662 | Down | -0.3679686245 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
