HCSGD entry for AUP1
1. General information
| Official gene symbol | AUP1 |
|---|---|
| Entrez ID | 550 |
| Gene full name | ancient ubiquitous protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0242010942 | 0.6660644884 | 0.3687063006 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.2760691447 |
| GSE13712_SHEAR | Down | -0.0238695760 |
| GSE13712_STATIC | Up | 0.0158045959 |
| GSE19018 | Down | -0.7418382815 |
| GSE19899_A1 | Up | 0.4091904724 |
| GSE19899_A2 | Up | 0.5740353871 |
| PubMed_21979375_A1 | Up | 0.5011348665 |
| PubMed_21979375_A2 | Up | 1.2554175795 |
| GSE35957 | Down | -0.5005954324 |
| GSE36640 | Up | 0.4222344167 |
| GSE54402 | Up | 0.5528120320 |
| GSE9593 | Up | 0.1134511788 |
| GSE43922 | Up | 0.5533898589 |
| GSE24585 | Down | -0.3263435255 |
| GSE37065 | Up | 0.1009961459 |
| GSE28863_A1 | Down | -0.3261390755 |
| GSE28863_A2 | Up | 0.1949742026 |
| GSE28863_A3 | Down | -0.1792516406 |
| GSE28863_A4 | Down | -0.2074126213 |
| GSE48662 | Up | 0.3109425834 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025826 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028820 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031413 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031413 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037175 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042060 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044801 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049386 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT051897 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
