HCSGD entry for SLC35F6
1. General information
| Official gene symbol | SLC35F6 |
|---|---|
| Entrez ID | 54978 |
| Gene full name | solute carrier family 35, member F6 |
| Other gene symbols | ANT2BP C2orf18 TANGO9 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005765 | Lysosomal membrane | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0008284 | Positive regulation of cell proliferation | IMP | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:1901029 | Negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0543546636 | 0.8126547814 | 0.5089537887 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2083216425 |
| GSE13712_SHEAR | Down | -0.0295405727 |
| GSE13712_STATIC | Up | 0.3329724479 |
| GSE19018 | Down | -0.1818030575 |
| GSE19899_A1 | Up | 0.0341573054 |
| GSE19899_A2 | Up | 0.4186923316 |
| PubMed_21979375_A1 | Up | 1.0119747580 |
| PubMed_21979375_A2 | Up | 0.6914494387 |
| GSE35957 | Down | -0.0821791769 |
| GSE36640 | Up | 0.3896088227 |
| GSE54402 | Up | 0.1297589879 |
| GSE9593 | Up | 0.2718140417 |
| GSE43922 | Up | 0.4715284265 |
| GSE24585 | Down | -0.6432174136 |
| GSE37065 | Down | -0.1055740505 |
| GSE28863_A1 | Up | 0.2217197556 |
| GSE28863_A2 | Up | 0.8552475894 |
| GSE28863_A3 | Down | -0.1031857732 |
| GSE28863_A4 | Down | -0.3524247136 |
| GSE48662 | Up | 0.1112764385 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT002498 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT005243 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036482 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
