HCSGD entry for COMMD4
1. General information
| Official gene symbol | COMMD4 |
|---|---|
| Entrez ID | 54939 |
| Gene full name | COMM domain containing 4 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8960852551 | 0.0127046275 | 0.9999902473 | 0.2226354860 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1134297278 |
| GSE13712_SHEAR | Down | -0.5073075098 |
| GSE13712_STATIC | Down | -0.3279704833 |
| GSE19018 | Down | -0.0540977460 |
| GSE19899_A1 | Down | -0.9513079926 |
| GSE19899_A2 | Down | -1.2907644829 |
| PubMed_21979375_A1 | Down | -0.0543902797 |
| PubMed_21979375_A2 | Down | -1.6952339120 |
| GSE35957 | Down | -0.4612857371 |
| GSE36640 | Down | -1.2151348230 |
| GSE54402 | Up | 0.0180676534 |
| GSE9593 | Down | -0.0851822966 |
| GSE43922 | Down | -0.1842760088 |
| GSE24585 | Up | 0.0379790578 |
| GSE37065 | Down | -0.0907108541 |
| GSE28863_A1 | Up | 0.3468921220 |
| GSE28863_A2 | Down | -0.2240232094 |
| GSE28863_A3 | Up | 0.3582494991 |
| GSE28863_A4 | Up | 0.2686449330 |
| GSE48662 | Down | -0.1129673748 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-502-3p | MIMAT0004775 | MIRT037986 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-500a-3p | MIMAT0002871 | MIRT041159 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044655 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
