HCSGD entry for LIME1
1. General information
| Official gene symbol | LIME1 |
|---|---|
| Entrez ID | 54923 |
| Gene full name | Lck interacting transmembrane adaptor 1 |
| Other gene symbols | LIME LP8067 dJ583P15.4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0050852 | T cell receptor signaling pathway | IEA | biological_process |
| GO:0050853 | B cell receptor signaling pathway | IEA | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3838105809 | 0.7948589415 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0230859991 |
| GSE13712_SHEAR | Up | 0.4736322874 |
| GSE13712_STATIC | Up | 0.0822553981 |
| GSE19018 | Down | -0.1444688344 |
| GSE19899_A1 | Down | -0.0490962333 |
| GSE19899_A2 | Down | -0.2796151400 |
| PubMed_21979375_A1 | Down | -0.0149010900 |
| PubMed_21979375_A2 | Down | -0.1719595317 |
| GSE35957 | Up | 0.2709306953 |
| GSE36640 | Up | 0.0027852042 |
| GSE54402 | Up | 0.0564602549 |
| GSE9593 | Up | 0.0725609574 |
| GSE43922 | Up | 0.1199115180 |
| GSE24585 | Up | 0.0869881725 |
| GSE37065 | Up | 0.0319555910 |
| GSE28863_A1 | Down | -0.1357715770 |
| GSE28863_A2 | Down | -0.0953747096 |
| GSE28863_A3 | Up | 0.4431807085 |
| GSE28863_A4 | Up | 0.0999081958 |
| GSE48662 | Up | 0.1946862756 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
