HCSGD entry for CMTM6
1. General information
| Official gene symbol | CMTM6 |
|---|---|
| Entrez ID | 54918 |
| Gene full name | CKLF-like MARVEL transmembrane domain containing 6 |
| Other gene symbols | CKLFSF6 PRO2219 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005125 | Cytokine activity | IEA | molecular_function |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0006935 | Chemotaxis | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8588546066 | 0.1402395882 | 0.9999902473 | 0.7204447502 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1335498741 |
| GSE13712_SHEAR | Down | -0.0863718338 |
| GSE13712_STATIC | Down | -0.0359756183 |
| GSE19018 | Down | -0.3232160418 |
| GSE19899_A1 | Down | -0.0554913741 |
| GSE19899_A2 | Down | -0.3662847738 |
| PubMed_21979375_A1 | Down | -0.3207577506 |
| PubMed_21979375_A2 | Down | -0.2826657929 |
| GSE35957 | Up | 0.1458057311 |
| GSE36640 | Up | 0.5491591223 |
| GSE54402 | Up | 0.2024341481 |
| GSE9593 | Up | 0.0766220872 |
| GSE43922 | Down | -0.0433749510 |
| GSE24585 | Up | 0.3229098960 |
| GSE37065 | Down | -0.0310569013 |
| GSE28863_A1 | Down | -0.1120607005 |
| GSE28863_A2 | Up | 0.0254786109 |
| GSE28863_A3 | Down | -0.5184628880 |
| GSE28863_A4 | Down | -0.1872442867 |
| GSE48662 | Down | -0.5695540387 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-378a-3p | MIMAT0000732 | MIRT019660 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021869 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024261 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026194 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029005 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049092 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
