HCSGD entry for YTHDF1
1. General information
| Official gene symbol | YTHDF1 |
|---|---|
| Entrez ID | 54915 |
| Gene full name | YTH domain family, member 1 |
| Other gene symbols | C20orf21 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:1990247 | N6-methyladenosine-containing RNA binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1321267771 | 0.8358987121 | 0.7375840721 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.6647580245 |
| GSE13712_SHEAR | Down | -0.2986992668 |
| GSE13712_STATIC | Down | -0.0702446442 |
| GSE19018 | Down | -0.4531728272 |
| GSE19899_A1 | Up | 0.0804703364 |
| GSE19899_A2 | Up | 0.5570842831 |
| PubMed_21979375_A1 | Down | -0.0434007240 |
| PubMed_21979375_A2 | Up | 0.8818671365 |
| GSE35957 | Down | -0.1623705187 |
| GSE36640 | Up | 0.0026625493 |
| GSE54402 | Up | 0.2758951741 |
| GSE9593 | Up | 0.0076819852 |
| GSE43922 | Up | 0.1563117552 |
| GSE24585 | Up | 0.1161726897 |
| GSE37065 | Down | -0.0416307026 |
| GSE28863_A1 | Up | 0.1357638954 |
| GSE28863_A2 | Up | 0.2937859033 |
| GSE28863_A3 | Down | -0.5140272041 |
| GSE28863_A4 | Up | 0.2125880317 |
| GSE48662 | Down | -0.0224694885 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-331-3p | MIMAT0000760 | MIRT043558 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-301a-3p | MIMAT0000688 | MIRT044213 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045448 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
