HCSGD entry for ANKHD1
1. General information
| Official gene symbol | ANKHD1 |
|---|---|
| Entrez ID | 54882 |
| Gene full name | ankyrin repeat and KH domain containing 1 |
| Other gene symbols | MASK VBARP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6223682991 | 0.2804608829 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2739055122 |
| GSE13712_SHEAR | Down | -0.0886402040 |
| GSE13712_STATIC | Down | -0.0572161377 |
| GSE19018 | Down | -0.2834824730 |
| GSE19899_A1 | Down | -0.0979691764 |
| GSE19899_A2 | Up | 0.1404117209 |
| PubMed_21979375_A1 | Up | 0.0403736577 |
| PubMed_21979375_A2 | Up | 0.6791756704 |
| GSE35957 | Down | -0.0297333859 |
| GSE36640 | Down | -0.4277624692 |
| GSE54402 | Down | -0.0272663524 |
| GSE9593 | Up | 0.1253281947 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.2739739100 |
| GSE28863_A2 | Up | 0.2155236306 |
| GSE28863_A3 | Down | -0.2338702731 |
| GSE28863_A4 | Down | -0.3815029249 |
| GSE48662 | Down | -0.2752901895 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-424-5p | MIMAT0001341 | MIRT042445 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044414 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-185-5p | MIMAT0000455 | MIRT045336 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
