HCSGD entry for VPS13C
1. General information
| Official gene symbol | VPS13C |
|---|---|
| Entrez ID | 54832 |
| Gene full name | vacuolar protein sorting 13 homolog C (S. cerevisiae) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
Not in the Gene Ontology4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0587636830 | 0.8426762015 | 0.5257372196 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0171508426 |
| GSE13712_SHEAR | Up | 0.1828396175 |
| GSE13712_STATIC | Up | 0.1928157917 |
| GSE19018 | Up | 0.0179702671 |
| GSE19899_A1 | Down | -0.0236939101 |
| GSE19899_A2 | Down | -0.0808504020 |
| PubMed_21979375_A1 | Down | -0.0230107877 |
| PubMed_21979375_A2 | Up | 0.5006294598 |
| GSE35957 | Up | 0.0248879990 |
| GSE36640 | Up | 0.3201187492 |
| GSE54402 | Down | -0.0520164052 |
| GSE9593 | Down | -0.0681953363 |
| GSE43922 | Down | -0.1030800536 |
| GSE24585 | Up | 0.2300881672 |
| GSE37065 | Up | 0.1044423889 |
| GSE28863_A1 | Up | 0.7305218087 |
| GSE28863_A2 | Up | 1.4784082916 |
| GSE28863_A3 | Down | -0.4712967347 |
| GSE28863_A4 | Up | 0.1145099562 |
| GSE48662 | Up | 0.2653380918 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-128-3p | MIMAT0000424 | MIRT022057 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024877 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026941 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030336 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-326 | MIMAT0000756 | MIRT043638 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-378a-3p | MIMAT0000732 | MIRT043946 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045079 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
