HCSGD entry for LY6K
1. General information
| Official gene symbol | LY6K |
|---|---|
| Entrez ID | 54742 |
| Gene full name | lymphocyte antigen 6 complex, locus K |
| Other gene symbols | CT97 HSJ001348 ly-6K |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9874636412 | 0.0030736028 | 0.9999902473 | 0.1114329201 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1839437244 |
| GSE13712_SHEAR | Down | -0.0817476928 |
| GSE13712_STATIC | Down | -0.2884124614 |
| GSE19018 | Up | 0.0699598321 |
| GSE19899_A1 | Down | -0.4492805397 |
| GSE19899_A2 | Down | -0.6226055631 |
| PubMed_21979375_A1 | Down | -1.1889828339 |
| PubMed_21979375_A2 | Down | -0.4988033945 |
| GSE35957 | Down | -2.1595966830 |
| GSE36640 | Down | -1.7704312557 |
| GSE54402 | Down | -0.8532159183 |
| GSE9593 | Down | -0.1770087670 |
| GSE43922 | Down | -0.6913634180 |
| GSE24585 | Down | -0.0107168053 |
| GSE37065 | Down | -0.0783534219 |
| GSE28863_A1 | Down | -0.0731177043 |
| GSE28863_A2 | Down | -0.0465497545 |
| GSE28863_A3 | Down | -0.4837711892 |
| GSE28863_A4 | Up | 0.0071064451 |
| GSE48662 | Down | -0.8714104913 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT001541 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031622 | Proteomics | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
