HCSGD entry for SLC6A20
1. General information
| Official gene symbol | SLC6A20 |
|---|---|
| Entrez ID | 54716 |
| Gene full name | solute carrier family 6 (proline IMINO transporter), member 20 |
| Other gene symbols | SIT1 XT3 Xtrp3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003333 | Amino acid transmembrane transport | IDA | biological_process |
| GO:0005328 | Neurotransmitter:sodium symporter activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005887 | Integral component of plasma membrane | IEA | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006865 | Amino acid transport | IDA TAS | biological_process |
| GO:0015171 | Amino acid transmembrane transporter activity | IDA | molecular_function |
| GO:0015816 | Glycine transport | IMP | biological_process |
| GO:0015824 | Proline transport | IMP | biological_process |
| GO:0016324 | Apical plasma membrane | ISS | cellular_component |
| GO:0034220 | Ion transmembrane transport | IDA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6576579157 | 0.8706491129 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0467939402 |
| GSE13712_SHEAR | Down | -0.0141554184 |
| GSE13712_STATIC | Up | 0.0554927213 |
| GSE19018 | Up | 0.2635344346 |
| GSE19899_A1 | Down | -0.0594210607 |
| GSE19899_A2 | Down | -0.1448172125 |
| PubMed_21979375_A1 | Down | -0.1791594425 |
| PubMed_21979375_A2 | Up | 0.0592961006 |
| GSE35957 | Up | 0.0645163948 |
| GSE36640 | Up | 0.0237891354 |
| GSE54402 | Up | 0.0298639139 |
| GSE9593 | Up | 0.1476164331 |
| GSE43922 | Up | 0.0286957267 |
| GSE24585 | Up | 0.1580612302 |
| GSE37065 | Up | 0.0267056373 |
| GSE28863_A1 | Down | -0.0579939225 |
| GSE28863_A2 | Down | -0.0075287145 |
| GSE28863_A3 | Up | 0.2173272393 |
| GSE28863_A4 | Up | 0.0936010057 |
| GSE48662 | Down | -0.0634698300 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
