HCSGD entry for ZNHIT6
1. General information
| Official gene symbol | ZNHIT6 |
|---|---|
| Entrez ID | 54680 |
| Gene full name | zinc finger, HIT-type containing 6 |
| Other gene symbols | BCD1 C1orf181 NY-BR-75 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000492 | Box C/D snoRNP assembly | IMP | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0042254 | Ribosome biogenesis | IEA | biological_process |
| GO:0042802 | Identical protein binding | IPI | molecular_function |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
| GO:0070761 | Pre-snoRNP complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2904061928 | 0.2551998556 | 0.9896025628 | 0.9688613010 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0455662800 |
| GSE13712_SHEAR | Down | -0.0668099294 |
| GSE13712_STATIC | Up | 0.1792997532 |
| GSE19018 | Down | -0.5585777177 |
| GSE19899_A1 | Up | 0.0338053954 |
| GSE19899_A2 | Down | -0.1995490115 |
| PubMed_21979375_A1 | Down | -0.0635516868 |
| PubMed_21979375_A2 | Down | -0.0294395698 |
| GSE35957 | Up | 0.4273158553 |
| GSE36640 | Up | 0.2564628894 |
| GSE54402 | Down | -0.1075519314 |
| GSE9593 | Up | 0.2371346440 |
| GSE43922 | Down | -0.0520915955 |
| GSE24585 | Down | -0.3976383169 |
| GSE37065 | Down | -0.1292355803 |
| GSE28863_A1 | Up | 0.2184488235 |
| GSE28863_A2 | Up | 1.3898858237 |
| GSE28863_A3 | Up | 0.1065734372 |
| GSE28863_A4 | Down | -0.3281521006 |
| GSE48662 | Down | -0.0499357740 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022197 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045407 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
