HCSGD entry for CHRAC1
1. General information
| Official gene symbol | CHRAC1 |
|---|---|
| Entrez ID | 54108 |
| Gene full name | chromatin accessibility complex 1 |
| Other gene symbols | CHARC1 CHARC15 CHRAC-1 CHRAC-15 CHRAC15 YCL1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA NAS | molecular_function |
| GO:0003887 | DNA-directed DNA polymerase activity | NAS | molecular_function |
| GO:0006261 | DNA-dependent DNA replication | NAS | biological_process |
| GO:0006338 | Chromatin remodeling | IEA NAS | biological_process |
| GO:0008152 | Metabolic process | NAS | biological_process |
| GO:0008622 | Epsilon DNA polymerase complex | NAS | cellular_component |
| GO:0008623 | CHRAC | IEA NAS | cellular_component |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
| GO:0046982 | Protein heterodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9222008054 | 0.0660095095 | 0.9999902473 | 0.4849885850 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1080279612 |
| GSE13712_SHEAR | Down | -0.1956544939 |
| GSE13712_STATIC | Down | -0.2016507432 |
| GSE19018 | Down | -0.5971393577 |
| GSE19899_A1 | Down | -0.5388054239 |
| GSE19899_A2 | Down | -0.1458778569 |
| PubMed_21979375_A1 | Up | 0.2702936112 |
| PubMed_21979375_A2 | Down | -0.1501882021 |
| GSE35957 | Down | -0.1845137011 |
| GSE36640 | Down | -0.8578451455 |
| GSE54402 | Up | 0.2676137668 |
| GSE9593 | Up | 0.3788878899 |
| GSE43922 | Down | -0.0416782575 |
| GSE24585 | Up | 0.1769333051 |
| GSE37065 | Down | -0.2386131562 |
| GSE28863_A1 | Down | -0.1508814236 |
| GSE28863_A2 | Up | 0.0570902266 |
| GSE28863_A3 | Down | -0.2779189109 |
| GSE28863_A4 | Down | -0.0510459129 |
| GSE48662 | Down | -0.1387060247 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020660 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022520 | Proteomics;Microarray | Non-Functional MTI (Weak) | 18668037 |
| hsa-miR-1 | MIMAT0000416 | MIRT023751 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT032287 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037537 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050214 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
