HCSGD entry for PCBP3
1. General information
| Official gene symbol | PCBP3 |
|---|---|
| Entrez ID | 54039 |
| Gene full name | poly(rC) binding protein 3 |
| Other gene symbols | ALPHA-CP3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA NAS | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0016071 | MRNA metabolic process | NAS | biological_process |
| GO:0030529 | Ribonucleoprotein complex | IEA | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3868116637 | 0.4838123248 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0638484017 |
| GSE13712_SHEAR | Up | 0.3266473512 |
| GSE13712_STATIC | Down | -0.0753575272 |
| GSE19018 | Up | 0.3874969845 |
| GSE19899_A1 | Down | -0.1026105439 |
| GSE19899_A2 | Down | -0.3905555313 |
| PubMed_21979375_A1 | Down | -0.3852084573 |
| PubMed_21979375_A2 | Down | -0.2766407597 |
| GSE35957 | Down | -0.1855761121 |
| GSE36640 | Up | 0.0901356975 |
| GSE54402 | Down | -0.0849790586 |
| GSE9593 | Up | 0.4315988911 |
| GSE43922 | Down | -0.4600774053 |
| GSE24585 | Up | 0.1754907804 |
| GSE37065 | Up | 0.0329367654 |
| GSE28863_A1 | Up | 0.1617846951 |
| GSE28863_A2 | Up | 0.2405269950 |
| GSE28863_A3 | Up | 0.3201288709 |
| GSE28863_A4 | Up | 0.0170380514 |
| GSE48662 | Up | 0.0410882424 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018087 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029600 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
