HCSGD entry for BRWD1
1. General information
| Official gene symbol | BRWD1 |
|---|---|
| Entrez ID | 54014 |
| Gene full name | bromodomain and WD repeat domain containing 1 |
| Other gene symbols | C21orf107 N143 WDR9 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006357 | Regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0007010 | Cytoskeleton organization | IMP | biological_process |
| GO:0008360 | Regulation of cell shape | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0140366020 | 0.9245582425 | 0.2939858506 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3208101383 |
| GSE13712_SHEAR | Up | 0.0242262895 |
| GSE13712_STATIC | Down | -0.0876511462 |
| GSE19018 | Up | 0.4149403050 |
| GSE19899_A1 | Up | 0.3089049116 |
| GSE19899_A2 | Up | 0.3307213624 |
| PubMed_21979375_A1 | Up | 0.5375495409 |
| PubMed_21979375_A2 | Up | 0.5350035286 |
| GSE35957 | Up | 0.5038925331 |
| GSE36640 | Up | 0.8234309327 |
| GSE54402 | Up | 0.1753940512 |
| GSE9593 | Down | -0.2575723073 |
| GSE43922 | Down | -0.1387008426 |
| GSE24585 | Up | 0.2607577046 |
| GSE37065 | Up | 0.1636066489 |
| GSE28863_A1 | Up | 0.9018498592 |
| GSE28863_A2 | Up | 0.9098281258 |
| GSE28863_A3 | Down | -0.4116112592 |
| GSE28863_A4 | Up | 0.1875730193 |
| GSE48662 | Up | 0.1273376783 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020133 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022230 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-33a-5p | MIMAT0000091 | MIRT028227 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-106b-5p | MIMAT0000680 | MIRT044300 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT045856 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT048284 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15a-5p | MIMAT0000068 | MIRT051333 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
