HCSGD entry for RIPPLY3

1. General information

Official gene symbolRIPPLY3
Entrez ID53820
Gene full nameripply3 homolog (zebrafish)
Other gene symbolsDSCR6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000122Negative regulation of transcription from RNA polymerase II promoterIEAbiological_process
GO:0005634NucleusNAScellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007507Heart developmentIEAbiological_process
GO:0008150Biological_processNDbiological_process
GO:0060037Pharyngeal system developmentIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.49417122830.41529376920.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0078115701
GSE13712_SHEARDown-0.1007904746
GSE13712_STATICDown-0.1319983428
GSE19018Down-0.1006741271
GSE19899_A1Up0.2418570718
GSE19899_A2Down-0.2519575166
PubMed_21979375_A1Up0.3008818346
PubMed_21979375_A2Down-0.0285356285
GSE35957Up0.1788240280
GSE36640Down-0.2758188173
GSE54402Down-0.0496208653
GSE9593Up0.0192768489
GSE43922Up0.0567980889
GSE24585Up0.5732231305
GSE37065Down-0.0966138319
GSE28863_A1Down-0.4306008282
GSE28863_A2Down-0.3185937606
GSE28863_A3Up0.3330681142
GSE28863_A4Up0.0526875158
GSE48662Up0.0729732868

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.