HCSGD entry for PMS2P1
1. General information
| Official gene symbol | PMS2P1 |
|---|---|
| Entrez ID | 5379 |
| Gene full name | postmeiotic segregation increased 2 pseudogene 1 |
| Other gene symbols | PMS2L1 PMS2L13 PMS2L6 PMS2L7 PMS2L8 PMS3 PMS8 PMSR1 PMSR2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003697 | Single-stranded DNA binding | IBA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0006200 | ATP catabolic process | IBA | biological_process |
| GO:0006298 | Mismatch repair | IBA | biological_process |
| GO:0007131 | Reciprocal meiotic recombination | IBA | biological_process |
| GO:0016301 | Kinase activity | IEA | molecular_function |
| GO:0016446 | Somatic hypermutation of immunoglobulin genes | IBA | biological_process |
| GO:0016887 | ATPase activity | IBA | molecular_function |
| GO:0030983 | Mismatched DNA binding | IEA | molecular_function |
| GO:0032300 | Mismatch repair complex | IBA | cellular_component |
| GO:0032389 | MutLalpha complex | IBA | cellular_component |
| GO:0032407 | MutSalpha complex binding | IBA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9632913453 | 0.1162131036 | 0.9999902473 | 0.6536342802 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2157600620 |
| GSE13712_SHEAR | Down | -0.0109707082 |
| GSE13712_STATIC | Down | -0.0799241600 |
| GSE19018 | Down | -0.0140054981 |
| GSE19899_A1 | Down | -0.3404774850 |
| GSE19899_A2 | Down | -0.0544577587 |
| PubMed_21979375_A1 | Down | -0.2152770766 |
| PubMed_21979375_A2 | Down | -0.5211309503 |
| GSE35957 | Down | -0.3331153510 |
| GSE36640 | Down | -0.1772793000 |
| GSE54402 | Down | -0.3772884890 |
| GSE9593 | Up | 0.0144196500 |
| GSE43922 | Down | -0.2669431227 |
| GSE24585 | Up | 0.1641101024 |
| GSE37065 | Down | -0.1521553755 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.0857212358 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
