HCSGD entry for PMM1
1. General information
| Official gene symbol | PMM1 |
|---|---|
| Entrez ID | 5372 |
| Gene full name | phosphomannomutase 1 |
| Other gene symbols | Sec53 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004615 | Phosphomannomutase activity | IDA IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006013 | Mannose metabolic process | IDA | biological_process |
| GO:0006488 | Dolichol-linked oligosaccharide biosynthetic process | TAS | biological_process |
| GO:0009298 | GDP-mannose biosynthetic process | IEA TAS | biological_process |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0019307 | Mannose biosynthetic process | IEA | biological_process |
| GO:0043025 | Neuronal cell body | IEA | cellular_component |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2743103340 | 0.2876583109 | 0.9705544404 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0774547933 |
| GSE13712_SHEAR | Up | 0.1369636244 |
| GSE13712_STATIC | Up | 0.4405657142 |
| GSE19018 | Up | 0.6220978542 |
| GSE19899_A1 | Down | -0.2317054144 |
| GSE19899_A2 | Down | -0.2685986643 |
| PubMed_21979375_A1 | Up | 0.5179103868 |
| PubMed_21979375_A2 | Down | -0.6607320010 |
| GSE35957 | Down | -0.5582638877 |
| GSE36640 | Up | 0.2358194886 |
| GSE54402 | Up | 0.1062191722 |
| GSE9593 | Up | 0.1092862760 |
| GSE43922 | Down | -0.1866567317 |
| GSE24585 | Up | 0.3472320307 |
| GSE37065 | Down | -0.1868494252 |
| GSE28863_A1 | Down | -0.0327071738 |
| GSE28863_A2 | Down | -0.2998690436 |
| GSE28863_A3 | Down | -0.4074540265 |
| GSE28863_A4 | Up | 0.1104242076 |
| GSE48662 | Up | 0.3018130725 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
