HCSGD entry for ATP5J
1. General information
| Official gene symbol | ATP5J |
|---|---|
| Entrez ID | 522 |
| Gene full name | ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 |
| Other gene symbols | ATP5 ATP5A ATPM CF6 F6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000276 | Mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEA | cellular_component |
| GO:0005215 | Transporter activity | NAS | molecular_function |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005743 | Mitochondrial inner membrane | TAS | cellular_component |
| GO:0005753 | Mitochondrial proton-transporting ATP synthase complex | IDA | cellular_component |
| GO:0006200 | ATP catabolic process | IDA | biological_process |
| GO:0015078 | Hydrogen ion transmembrane transporter activity | IEA | molecular_function |
| GO:0015986 | ATP synthesis coupled proton transport | IEA | biological_process |
| GO:0016887 | ATPase activity | IDA | molecular_function |
| GO:0022857 | Transmembrane transporter activity | IC | molecular_function |
| GO:0022904 | Respiratory electron transport chain | TAS | biological_process |
| GO:0042776 | Mitochondrial ATP synthesis coupled proton transport | IC TAS | biological_process |
| GO:0044237 | Cellular metabolic process | TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8467906007 | 0.4229617112 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2806997495 |
| GSE13712_SHEAR | Down | -0.1995857208 |
| GSE13712_STATIC | Down | -0.1419636441 |
| GSE19018 | Up | 0.0568838300 |
| GSE19899_A1 | Up | 0.0820833559 |
| GSE19899_A2 | Up | 0.0593853943 |
| PubMed_21979375_A1 | Down | -0.2444568010 |
| PubMed_21979375_A2 | Up | 0.0502536525 |
| GSE35957 | Down | -0.2440042543 |
| GSE36640 | Down | -0.0614685590 |
| GSE54402 | Up | 0.0309947699 |
| GSE9593 | Down | -0.2445342244 |
| GSE43922 | Up | 0.0465050396 |
| GSE24585 | Down | -0.0229676773 |
| GSE37065 | Down | -0.0950386337 |
| GSE28863_A1 | Down | -0.2772537573 |
| GSE28863_A2 | Down | -0.3315705269 |
| GSE28863_A3 | Up | 0.2914655136 |
| GSE28863_A4 | Up | 0.0721176585 |
| GSE48662 | Up | 0.0491757944 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1301-3p | MIMAT0005797 | MIRT036000 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041867 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043352 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049819 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
