HCSGD entry for PEX13
1. General information
| Official gene symbol | PEX13 |
|---|---|
| Entrez ID | 5194 |
| Gene full name | peroxisomal biogenesis factor 13 |
| Other gene symbols | NALD PBD11A PBD11B ZWS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001561 | Fatty acid alpha-oxidation | ISS | biological_process |
| GO:0001764 | Neuron migration | ISS | biological_process |
| GO:0001967 | Suckling behavior | ISS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005778 | Peroxisomal membrane | IDA | cellular_component |
| GO:0005779 | Integral component of peroxisomal membrane | IDA | cellular_component |
| GO:0007626 | Locomotory behavior | ISS | biological_process |
| GO:0016560 | Protein import into peroxisome matrix, docking | IMP TAS | biological_process |
| GO:0021795 | Cerebral cortex cell migration | ISS | biological_process |
| GO:0060152 | Microtubule-based peroxisome localization | ISS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7245225675 | 0.0714836252 | 0.9999902473 | 0.5044459561 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1326633024 |
| GSE13712_SHEAR | Up | 0.4018880518 |
| GSE13712_STATIC | Up | 0.2521699038 |
| GSE19018 | Up | 0.0552090104 |
| GSE19899_A1 | Up | 0.1255487763 |
| GSE19899_A2 | Down | -0.0054110337 |
| PubMed_21979375_A1 | Up | 0.6198862402 |
| PubMed_21979375_A2 | Up | 0.0372371304 |
| GSE35957 | Down | -0.0572594301 |
| GSE36640 | Down | -0.8142731831 |
| GSE54402 | Up | 0.0281230283 |
| GSE9593 | Down | -0.2207063143 |
| GSE43922 | Up | 0.0057816575 |
| GSE24585 | Down | -0.0432966033 |
| GSE37065 | Down | -0.0733127481 |
| GSE28863_A1 | Down | -0.4612318555 |
| GSE28863_A2 | Down | -0.2184925452 |
| GSE28863_A3 | Down | -0.6139496364 |
| GSE28863_A4 | Down | -0.5100922930 |
| GSE48662 | Down | -0.0762400201 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT003820 | Microarray | Functional MTI (Weak) | 16822819 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026063 | Sequencing | Functional MTI (Weak) | 20371350 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
