HCSGD entry for SLC26A4
1. General information
| Official gene symbol | SLC26A4 |
|---|---|
| Entrez ID | 5172 |
| Gene full name | solute carrier family 26, member 4 |
| Other gene symbols | DFNB4 EVA PDS TDH2B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006885 | Regulation of pH | IEA ISS | biological_process |
| GO:0007605 | Sensory perception of sound | TAS | biological_process |
| GO:0008271 | Secondary active sulfate transmembrane transporter activity | IEA | molecular_function |
| GO:0008272 | Sulfate transport | TAS | biological_process |
| GO:0015108 | Chloride transmembrane transporter activity | IEA | molecular_function |
| GO:0015111 | Iodide transmembrane transporter activity | IEA | molecular_function |
| GO:0015116 | Sulfate transmembrane transporter activity | IEA TAS | molecular_function |
| GO:0015698 | Inorganic anion transport | TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016324 | Apical plasma membrane | IDA IEA ISS | cellular_component |
| GO:0031526 | Brush border membrane | IEA ISS | cellular_component |
| GO:0032880 | Regulation of protein localization | IEA ISS | biological_process |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:1902358 | Sulfate transmembrane transport | TAS | biological_process |
| GO:1902476 | Chloride transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0532832149 | 0.9503097565 | 0.5053089536 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4353850589 |
| GSE13712_SHEAR | Up | 0.3367549909 |
| GSE13712_STATIC | Up | 0.0547801460 |
| GSE19018 | Up | 0.2377892676 |
| GSE19899_A1 | Down | -0.0930333100 |
| GSE19899_A2 | Up | 0.5711499765 |
| PubMed_21979375_A1 | Up | 0.0812100361 |
| PubMed_21979375_A2 | Up | 0.3760169354 |
| GSE35957 | Down | -0.3299333661 |
| GSE36640 | Down | -0.0068809141 |
| GSE54402 | Up | 0.3850460765 |
| GSE9593 | Up | 0.9839663271 |
| GSE43922 | Up | 0.2981157461 |
| GSE24585 | Down | -0.0828672407 |
| GSE37065 | Up | 0.1305923322 |
| GSE28863_A1 | Down | -0.0017762214 |
| GSE28863_A2 | Up | 0.2018685779 |
| GSE28863_A3 | Up | 0.0397842717 |
| GSE28863_A4 | Up | 0.0478621068 |
| GSE48662 | Down | -0.1774634306 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT023097 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030168 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
