HCSGD entry for LUC7L2
1. General information
| Official gene symbol | LUC7L2 |
|---|---|
| Entrez ID | 51631 |
| Gene full name | LUC7-like 2 (S. cerevisiae) |
| Other gene symbols | CGI-74 LUC7B2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003729 | MRNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005685 | U1 snRNP | IEA | cellular_component |
| GO:0006376 | MRNA splice site selection | IEA | biological_process |
| GO:0016607 | Nuclear speck | IEA | cellular_component |
| GO:0019899 | Enzyme binding | IPI | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1014413548 | 0.9119552031 | 0.6631986836 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1364778798 |
| GSE13712_SHEAR | Up | 0.3181994894 |
| GSE13712_STATIC | Up | 0.4976941978 |
| GSE19018 | Down | -0.5062078615 |
| GSE19899_A1 | Up | 0.2160284727 |
| GSE19899_A2 | Up | 0.2618003089 |
| PubMed_21979375_A1 | Up | 0.6053816649 |
| PubMed_21979375_A2 | Up | 0.1888697465 |
| GSE35957 | Up | 0.1547159353 |
| GSE36640 | Down | -0.1026573261 |
| GSE54402 | Up | 0.0221398680 |
| GSE9593 | Up | 0.0585015096 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.5586735354 |
| GSE28863_A2 | Up | 0.4736938032 |
| GSE28863_A3 | Up | 0.0620417379 |
| GSE28863_A4 | Down | -0.2505196882 |
| GSE48662 | Down | -0.1320508141 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT002509 | Microarray//Microarray;Other | Functional MTI (Weak) | 15685193 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020489 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-7-5p | MIMAT0000252 | MIRT025632 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046734 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
