HCSGD entry for NT5DC3
1. General information
| Official gene symbol | NT5DC3 |
|---|---|
| Entrez ID | 51559 |
| Gene full name | 5'-nucleotidase domain containing 3 |
| Other gene symbols | TU12B1-TY TU12B1TY |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005829 | Cytosol | IEA | cellular_component |
| GO:0016787 | Hydrolase activity | IEA | molecular_function |
| GO:0043235 | Receptor complex | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9608555716 | 0.0311848600 | 0.9999902473 | 0.3313753331 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0514755827 |
| GSE13712_SHEAR | Up | 0.0021919806 |
| GSE13712_STATIC | Down | -0.0017981456 |
| GSE19018 | Down | -0.1459297331 |
| GSE19899_A1 | Down | -0.2531833758 |
| GSE19899_A2 | Down | -0.3188105874 |
| PubMed_21979375_A1 | Down | -0.2108800111 |
| PubMed_21979375_A2 | Down | -0.2657229043 |
| GSE35957 | Down | -0.1390186749 |
| GSE36640 | Down | -0.0854522288 |
| GSE54402 | Up | 0.0924731904 |
| GSE9593 | Up | 0.1198231074 |
| GSE43922 | Down | -1.0356255424 |
| GSE24585 | Down | -0.2995120021 |
| GSE37065 | Down | -0.0577394268 |
| GSE28863_A1 | Down | -0.1370011399 |
| GSE28863_A2 | Up | 0.2444240562 |
| GSE28863_A3 | Down | -1.2067701881 |
| GSE28863_A4 | Up | 0.1799569889 |
| GSE48662 | Down | -0.2835013990 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016515 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018478 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-378a-5p | MIMAT0000731 | MIRT043963 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047697 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049332 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
