HCSGD entry for NCKIPSD
1. General information
| Official gene symbol | NCKIPSD |
|---|---|
| Entrez ID | 51517 |
| Gene full name | NCK interacting protein with SH3 domain |
| Other gene symbols | AF3P21 DIP DIP1 ORF1 SPIN90 WASLBP WISH |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0005882 | Intermediate filament | NAS | cellular_component |
| GO:0006607 | NLS-bearing protein import into nucleus | TAS | biological_process |
| GO:0007010 | Cytoskeleton organization | NAS | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0008092 | Cytoskeletal protein binding | NAS | molecular_function |
| GO:0008180 | COP9 signalosome | IDA | cellular_component |
| GO:0017124 | SH3 domain binding | IEA | molecular_function |
| GO:0038096 | Fc-gamma receptor signaling pathway involved in phagocytosis | TAS | biological_process |
| GO:0045087 | Innate immune response | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5444072908 | 0.7949329319 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1473891470 |
| GSE13712_SHEAR | Up | 0.0017235507 |
| GSE13712_STATIC | Down | -0.0291265452 |
| GSE19018 | Up | 0.2484053403 |
| GSE19899_A1 | Up | 0.1080139149 |
| GSE19899_A2 | Up | 0.1861865249 |
| PubMed_21979375_A1 | Up | 0.3860280797 |
| PubMed_21979375_A2 | Up | 0.2373889535 |
| GSE35957 | Down | -0.1217434085 |
| GSE36640 | Up | 0.0397344834 |
| GSE54402 | Down | -0.0250819372 |
| GSE9593 | Up | 0.0250670331 |
| GSE43922 | Up | 0.0944763753 |
| GSE24585 | Down | -0.0022558975 |
| GSE37065 | Up | 0.0333405149 |
| GSE28863_A1 | Down | -0.0054178564 |
| GSE28863_A2 | Down | -0.0034137879 |
| GSE28863_A3 | Down | -0.1503348477 |
| GSE28863_A4 | Down | -0.2764307735 |
| GSE48662 | Up | 0.3101745175 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-148b-3p | MIMAT0000759 | MIRT019269 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-1226-3p | MIMAT0005577 | MIRT036524 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125a-5p | MIMAT0000443 | MIRT045772 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051609 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
