HCSGD entry for CHMP5
1. General information
| Official gene symbol | CHMP5 |
|---|---|
| Entrez ID | 51510 |
| Gene full name | charged multivesicular body protein 5 |
| Other gene symbols | C9orf83 HSPC177 PNAS-2 SNF7DC2 Vps60 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001919 | Regulation of receptor recycling | IEA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0007040 | Lysosome organization | IEA | biological_process |
| GO:0008333 | Endosome to lysosome transport | IEA | biological_process |
| GO:0010008 | Endosome membrane | IEA | cellular_component |
| GO:0015031 | Protein transport | IEA | biological_process |
| GO:0016032 | Viral process | TAS | biological_process |
| GO:0016197 | Endosomal transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0195794233 | 0.9876261008 | 0.3408754131 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2285863699 |
| GSE13712_SHEAR | Up | 0.5600032369 |
| GSE13712_STATIC | Up | 0.4739279254 |
| GSE19018 | Up | 0.4420671695 |
| GSE19899_A1 | Up | 0.3918584149 |
| GSE19899_A2 | Up | 0.3961386735 |
| PubMed_21979375_A1 | Up | 0.2977418453 |
| PubMed_21979375_A2 | Up | 0.2522495730 |
| GSE35957 | Up | 0.1391620911 |
| GSE36640 | Up | 0.5628676495 |
| GSE54402 | Up | 0.1583095228 |
| GSE9593 | Up | 0.1399028825 |
| GSE43922 | Up | 0.2491082137 |
| GSE24585 | Up | 0.2878252007 |
| GSE37065 | Up | 0.4929831446 |
| GSE28863_A1 | Down | -0.1934107113 |
| GSE28863_A2 | Up | 0.2635087694 |
| GSE28863_A3 | Down | -0.1571453722 |
| GSE28863_A4 | Up | 0.0461532892 |
| GSE48662 | Down | -0.1726617555 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
