HCSGD entry for TRAPPC4

1. General information

Official gene symbolTRAPPC4
Entrez ID51399
Gene full nametrafficking protein particle complex 4
Other gene symbolsHSPC172 PTD009 SBDN SYNBINDIN TRS23
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0005783Endoplasmic reticulumIEAcellular_component
GO:0005795Golgi stackIEA ISScellular_component
GO:0005801Cis-Golgi networkIEAcellular_component
GO:0006888ER to Golgi vesicle-mediated transportIEAbiological_process
GO:0008021Synaptic vesicleIEA ISScellular_component
GO:0016358Dendrite developmentIEA ISSbiological_process
GO:0030008TRAPP complexIEAcellular_component
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0030425DendriteIEA ISScellular_component
GO:0045202SynapseISScellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.68665055280.96246515710.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0715708282

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

S-PALMITOYL-L-CYSTEINEDB08342 -

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.