HCSGD entry for NGRN
1. General information
| Official gene symbol | NGRN |
|---|---|
| Entrez ID | 51335 |
| Gene full name | neugrin, neurite outgrowth associated |
| Other gene symbols | DSC92 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005634 | Nucleus | NAS | cellular_component |
| GO:0030182 | Neuron differentiation | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2778908400 | 0.0391226701 | 0.9751393548 | 0.3728393775 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4112902193 |
| GSE13712_SHEAR | Up | 0.4165758342 |
| GSE13712_STATIC | Up | 0.2218591373 |
| GSE19018 | Up | 0.2345262673 |
| GSE19899_A1 | Down | -0.0409555097 |
| GSE19899_A2 | Up | 0.0953735329 |
| PubMed_21979375_A1 | Down | -0.1070873387 |
| PubMed_21979375_A2 | Down | -0.1724567165 |
| GSE35957 | Up | 0.3974369307 |
| GSE36640 | Up | 0.4157855791 |
| GSE54402 | Down | -0.0999619812 |
| GSE9593 | Up | 0.3163105970 |
| GSE43922 | Down | -0.0076080234 |
| GSE24585 | Up | 0.2778509740 |
| GSE37065 | Down | -0.0593772117 |
| GSE28863_A1 | Down | -1.3352205204 |
| GSE28863_A2 | Down | -2.1101618236 |
| GSE28863_A3 | Down | -0.9360703090 |
| GSE28863_A4 | Down | -0.1257254449 |
| GSE48662 | Up | 0.2267596810 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-342-3p | MIMAT0000753 | MIRT043687 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045692 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-222-3p | MIMAT0000279 | MIRT046683 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 18836295 | Recently, some studies indicated that coupling special ligand like NGR (N: asparagine, G: glycine, R: arginine) peptide targeting to tumor blood vessels with delivery system can enhance the efficacy of gene transfection |
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