HCSGD entry for PDZD11
1. General information
| Official gene symbol | PDZD11 |
|---|---|
| Entrez ID | 51248 |
| Gene full name | PDZ domain containing 11 |
| Other gene symbols | AIPP1 PDZK11 PISP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005829 | Cytosol | IDA | cellular_component |
| GO:0008022 | Protein C-terminus binding | IPI | molecular_function |
| GO:0016323 | Basolateral plasma membrane | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9721571141 | 0.0405318719 | 0.9999902473 | 0.3799472222 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0778173387 |
| GSE13712_SHEAR | Down | -0.3012089720 |
| GSE13712_STATIC | Down | -0.1537065490 |
| GSE19018 | Up | 0.3430745405 |
| GSE19899_A1 | Down | -0.5264393550 |
| GSE19899_A2 | Down | -0.4136715311 |
| PubMed_21979375_A1 | Down | -0.6933971506 |
| PubMed_21979375_A2 | Down | -0.4975115581 |
| GSE35957 | Down | -0.4727198977 |
| GSE36640 | Down | -0.3667638334 |
| GSE54402 | Up | 0.1583839893 |
| GSE9593 | Up | 0.0579299326 |
| GSE43922 | Up | 0.0499426815 |
| GSE24585 | Up | 0.0783167078 |
| GSE37065 | Down | -0.0719449036 |
| GSE28863_A1 | Down | -0.2728750017 |
| GSE28863_A2 | Down | -0.3815462647 |
| GSE28863_A3 | Down | -0.1028577583 |
| GSE28863_A4 | Down | -0.0197907456 |
| GSE48662 | Down | -0.3148311528 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-130b-3p | MIMAT0000691 | MIRT020223 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT027941 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031136 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046001 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
