HCSGD entry for SDF4

1. General information

Official gene symbolSDF4
Entrez ID51150
Gene full namestromal cell derived factor 4
Other gene symbolsCab45 SDF-4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIDA IEA ISSmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmISScellular_component
GO:0005770Late endosomeISScellular_component
GO:0005796Golgi lumenISScellular_component
GO:0005886Plasma membraneISScellular_component
GO:0009650UV protectionISSbiological_process
GO:0017156Calcium ion-dependent exocytosisISSbiological_process
GO:0021549Cerebellum developmentISSbiological_process
GO:0032059BlebIEAcellular_component
GO:0042802Identical protein bindingISSmolecular_function
GO:0045444Fat cell differentiationISSbiological_process
GO:0045471Response to ethanolISSbiological_process
GO:0070625Zymogen granule exocytosisISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01509894760.96274067850.30523763441.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.3854770074
GSE13712_SHEARDown-0.0546151334
GSE13712_STATICUp0.0236850676
GSE19018Up0.6109886531
GSE19899_A1Down-0.3420844846
GSE19899_A2Up1.0284106691
PubMed_21979375_A1Up0.7792328730
PubMed_21979375_A2Up0.5301048547
GSE35957Up0.0562433933
GSE36640Up0.8074307107
GSE54402Down-0.0812765341
GSE9593Up0.4634352587
GSE43922Up0.0258021306
GSE24585Down-0.0836803504
GSE37065Down-0.0975134617
GSE28863_A1Up0.1042630809
GSE28863_A2Up0.3580311117
GSE28863_A3Up0.5122866142
GSE28863_A4Down-0.0590439100
GSE48662Up0.9703550970

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-484MIMAT0002174MIRT042088CLASHFunctional MTI (Weak)23622248
hsa-miR-378a-5pMIMAT0000731MIRT043980CLASHFunctional MTI (Weak)23622248
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.