HCSGD entry for RNFT1
1. General information
| Official gene symbol | RNFT1 |
|---|---|
| Entrez ID | 51136 |
| Gene full name | ring finger protein, transmembrane 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0344882641 | 0.5409389081 | 0.4261199164 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2909915300 |
| GSE13712_SHEAR | Up | 0.6777337539 |
| GSE13712_STATIC | Up | 0.5867543920 |
| GSE19018 | Down | -0.9228492151 |
| GSE19899_A1 | Up | 0.2271392821 |
| GSE19899_A2 | Down | -0.3408661161 |
| PubMed_21979375_A1 | Up | 0.3731908052 |
| PubMed_21979375_A2 | Up | 0.1548311992 |
| GSE35957 | Down | -0.3211547071 |
| GSE36640 | Up | 0.6863800981 |
| GSE54402 | Up | 0.3226674259 |
| GSE9593 | Down | -0.4010708308 |
| GSE43922 | Down | -0.0107416653 |
| GSE24585 | Up | 1.4895932740 |
| GSE37065 | Up | 0.1989018888 |
| GSE28863_A1 | Up | 0.0213535265 |
| GSE28863_A2 | Down | -0.2225798239 |
| GSE28863_A3 | Up | 0.1920017815 |
| GSE28863_A4 | Down | -0.0433249335 |
| GSE48662 | Down | -0.1881149037 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022586 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024404 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026234 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
