HCSGD entry for CCDC41
1. General information
| Official gene symbol | CCDC41 |
|---|---|
| Entrez ID | 51134 |
| Gene full name | coiled-coil domain containing 41 |
| Other gene symbols | NY-REN-58 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0005814 | Centriole | IDA | cellular_component |
| GO:0042384 | Cilium assembly | IMP | biological_process |
| GO:0048278 | Vesicle docking | IMP | biological_process |
| GO:0071539 | Protein localization to centrosome | IMP | biological_process |
| GO:0097539 | Ciliary transition fiber | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6999652483 | 0.0811411421 | 0.9999902473 | 0.5393222222 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1372899055 |
| GSE13712_SHEAR | Down | -0.1129921893 |
| GSE13712_STATIC | Down | -0.0598400723 |
| GSE19018 | Down | -1.1877920993 |
| GSE19899_A1 | Up | 0.1893377719 |
| GSE19899_A2 | Up | 0.2194652422 |
| PubMed_21979375_A1 | Up | 1.2259729508 |
| PubMed_21979375_A2 | Up | 0.1549746852 |
| GSE35957 | Down | -0.4626739633 |
| GSE36640 | Down | -0.8085882630 |
| GSE54402 | Up | 0.0873744168 |
| GSE9593 | Down | -0.3241177426 |
| GSE43922 | Up | 0.2050595735 |
| GSE24585 | Down | -0.4888204938 |
| GSE37065 | Down | -0.1414741346 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Down | -0.1611917429 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020921 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022865 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030000 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
