HCSGD entry for PHF11
1. General information
| Official gene symbol | PHF11 |
|---|---|
| Entrez ID | 51131 |
| Gene full name | PHD finger protein 11 |
| Other gene symbols | APY BCAP IGEL IGER IGHER NY-REN-34 NYREN34 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3684950382 | 0.2925739600 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2484976340 |
| GSE13712_SHEAR | Up | 0.2212548944 |
| GSE13712_STATIC | Up | 0.0462489092 |
| GSE19018 | Up | 0.0365486285 |
| GSE19899_A1 | Down | -0.4875599519 |
| GSE19899_A2 | Down | -0.0089298892 |
| PubMed_21979375_A1 | Down | -0.3091803422 |
| PubMed_21979375_A2 | Up | 0.2185225629 |
| GSE35957 | Down | -0.5227580537 |
| GSE36640 | Up | 0.2572856098 |
| GSE54402 | Down | -0.0379722669 |
| GSE9593 | Up | 0.1417464736 |
| GSE43922 | Down | -0.2260121907 |
| GSE24585 | Up | 0.2213436494 |
| GSE37065 | Up | 0.6150357688 |
| GSE28863_A1 | Up | 0.3196582252 |
| GSE28863_A2 | Up | 0.0448093378 |
| GSE28863_A3 | Down | -0.3713525557 |
| GSE28863_A4 | Down | -0.0765781334 |
| GSE48662 | Down | -0.2596271582 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
