HCSGD entry for PHF20L1
1. General information
| Official gene symbol | PHF20L1 |
|---|---|
| Entrez ID | 51105 |
| Gene full name | PHD finger protein 20-like 1 |
| Other gene symbols | TDRD20B |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8655170054 | 0.1663801527 | 0.9999902473 | 0.7890918452 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0405260397 |
| GSE13712_SHEAR | Down | -0.0035960948 |
| GSE13712_STATIC | Up | 0.0632358046 |
| GSE19018 | Down | -0.3989841081 |
| GSE19899_A1 | Down | -0.1307666261 |
| GSE19899_A2 | Down | -0.5836807590 |
| PubMed_21979375_A1 | Up | 0.1794212597 |
| PubMed_21979375_A2 | Down | -0.3085052796 |
| GSE35957 | Up | 0.1039217806 |
| GSE36640 | Down | -0.3084488138 |
| GSE54402 | Down | -0.1604090769 |
| GSE9593 | Down | -0.1021056585 |
| GSE43922 | Down | -0.0007253811 |
| GSE24585 | Up | 0.0148562769 |
| GSE37065 | Up | 0.0809149924 |
| GSE28863_A1 | Up | 0.4527535737 |
| GSE28863_A2 | Up | 0.3735960830 |
| GSE28863_A3 | Down | -0.5014050538 |
| GSE28863_A4 | Down | -0.2558849382 |
| GSE48662 | Up | 0.1810194875 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT020043 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT031038 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-769-3p | MIMAT0003887 | MIRT039060 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
