HCSGD entry for MRPS16
1. General information
| Official gene symbol | MRPS16 |
|---|---|
| Entrez ID | 51021 |
| Gene full name | mitochondrial ribosomal protein S16 |
| Other gene symbols | COXPD2 MRP-S16 RPMS16 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003735 | Structural constituent of ribosome | IEA NAS | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005763 | Mitochondrial small ribosomal subunit | IDA | cellular_component |
| GO:0005840 | Ribosome | IEA | cellular_component |
| GO:0006412 | Translation | IEA NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9139297823 | 0.1399972000 | 0.9999902473 | 0.7201223959 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0387231827 |
| GSE13712_SHEAR | Up | 0.0634407787 |
| GSE13712_STATIC | Up | 0.0537772695 |
| GSE19018 | Down | -0.2022286575 |
| GSE19899_A1 | Down | -0.6070212393 |
| GSE19899_A2 | Down | -0.2262576803 |
| PubMed_21979375_A1 | Up | 0.1165010563 |
| PubMed_21979375_A2 | Down | -0.5058321967 |
| GSE35957 | Down | -0.3366649033 |
| GSE36640 | Down | -0.8554384132 |
| GSE54402 | Up | 0.3154793958 |
| GSE9593 | Down | -0.1822181736 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.1331211164 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029903 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-935 | MIMAT0004978 | MIRT036669 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037587 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045285 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047902 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-197-3p | MIMAT0000227 | MIRT048083 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
