HCSGD entry for PAX9
1. General information
| Official gene symbol | PAX9 |
|---|---|
| Entrez ID | 5083 |
| Gene full name | paired box 9 |
| Other gene symbols | STHAG3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007492 | Endoderm development | IEA | biological_process |
| GO:0042476 | Odontogenesis | IEA | biological_process |
| GO:0042481 | Regulation of odontogenesis | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0060325 | Face morphogenesis | IEA | biological_process |
| GO:0071363 | Cellular response to growth factor stimulus | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4474423426 | 0.6959837924 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0779040745 |
| GSE13712_SHEAR | Down | -0.0154621401 |
| GSE13712_STATIC | Up | 0.0432058280 |
| GSE19018 | Up | 0.0537510294 |
| GSE19899_A1 | Up | 0.2023474532 |
| GSE19899_A2 | Down | -0.1513343602 |
| PubMed_21979375_A1 | Down | -0.1652671007 |
| PubMed_21979375_A2 | Up | 0.0827100316 |
| GSE35957 | Down | -0.0603434942 |
| GSE36640 | Up | 0.3198775650 |
| GSE54402 | Up | 0.0498379445 |
| GSE9593 | Up | 0.0258199482 |
| GSE43922 | Up | 0.0237140522 |
| GSE24585 | Up | 0.0134374539 |
| GSE37065 | Up | 0.0744475947 |
| GSE28863_A1 | Down | -0.1463647854 |
| GSE28863_A2 | Down | -0.2289669519 |
| GSE28863_A3 | Up | 0.2430008396 |
| GSE28863_A4 | Up | 0.1618201783 |
| GSE48662 | Up | 0.3133279718 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
