HCSGD entry for CNTN3
1. General information
| Official gene symbol | CNTN3 |
|---|---|
| Entrez ID | 5067 |
| Gene full name | contactin 3 (plasmacytoma associated) |
| Other gene symbols | BIG-1 PANG PCS |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | IEA | biological_process |
| GO:0007399 | Nervous system development | IEA | biological_process |
| GO:0031225 | Anchored component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0832507617 | 0.0103437901 | 0.6081171199 | 0.2004076527 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1577837519 |
| GSE13712_SHEAR | Down | -0.3403065204 |
| GSE13712_STATIC | Up | 0.0052208325 |
| GSE19018 | Up | 0.4805045830 |
| GSE19899_A1 | Down | -1.5633027830 |
| GSE19899_A2 | Down | -0.7859764747 |
| PubMed_21979375_A1 | Down | -1.0028344750 |
| PubMed_21979375_A2 | Down | -1.9717053348 |
| GSE35957 | Up | 3.5789530377 |
| GSE36640 | Up | 0.2083570767 |
| GSE54402 | Down | -1.8969935791 |
| GSE9593 | Up | 0.4072073302 |
| GSE43922 | Down | -0.3065715024 |
| GSE24585 | Up | 0.0800408420 |
| GSE37065 | Up | 0.3518507944 |
| GSE28863_A1 | Up | 0.5165299790 |
| GSE28863_A2 | Up | 0.7953280395 |
| GSE28863_A3 | Down | -0.3433684433 |
| GSE28863_A4 | Down | -0.3208984047 |
| GSE48662 | Down | -0.1223703353 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
