HCSGD entry for NUP88

1. General information

Official gene symbolNUP88
Entrez ID4927
Gene full namenucleoporin 88kDa
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0000278Mitotic cell cycleTASbiological_process
GO:0005215Transporter activityTASmolecular_function
GO:0005634NucleusIDAcellular_component
GO:0005643Nuclear poreIEAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005829CytosolTAScellular_component
GO:0005975Carbohydrate metabolic processTASbiological_process
GO:0007077Mitotic nuclear envelope disassemblyTASbiological_process
GO:0008645Hexose transportTASbiological_process
GO:0010827Regulation of glucose transportTASbiological_process
GO:0015031Protein transportIEAbiological_process
GO:0015758Glucose transportTASbiological_process
GO:0016032Viral processTASbiological_process
GO:0019221Cytokine-mediated signaling pathwayTASbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0051028MRNA transportIEAbiological_process
GO:0055085Transmembrane transportTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.97729075260.02664586830.99999024730.3123027147

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0825661992
GSE13712_SHEARDown-0.1372833382
GSE13712_STATICDown-0.0407668905
GSE19018Down-0.1584336475
GSE19899_A1Down-0.5181975519
GSE19899_A2Down-0.3898713181
PubMed_21979375_A1Up0.1878762601
PubMed_21979375_A2Down-0.3634043552
GSE35957Down-0.3076238000
GSE36640Down-0.5769827795
GSE54402Up0.1446356751
GSE9593Down-0.2461435800
GSE43922Down-0.4966229170
GSE24585Down-0.1328860303
GSE37065Down-0.0633875734
GSE28863_A1Up0.0030019335
GSE28863_A2Down-0.1544328142
GSE28863_A3Down-0.9210656072
GSE28863_A4Up0.1969617673
GSE48662Down-0.3941350436

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.