HCSGD entry for NUCB1
1. General information
| Official gene symbol | NUCB1 |
|---|---|
| Entrez ID | 4924 |
| Gene full name | nucleobindin 1 |
| Other gene symbols | CALNUC NUC |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005615 | Extracellular space | TAS | cellular_component |
| GO:0005793 | Endoplasmic reticulum-Golgi intermediate compartment | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IDA | cellular_component |
| GO:0015630 | Microtubule cytoskeleton | IDA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0693373276 | 0.0967928042 | 0.5633377661 | 0.5928737381 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1350707750 |
| GSE13712_SHEAR | Down | -0.6757946516 |
| GSE13712_STATIC | Down | -0.5353140861 |
| GSE19018 | Up | 0.5033931057 |
| GSE19899_A1 | Down | -0.8009680725 |
| GSE19899_A2 | Up | 0.0340034125 |
| PubMed_21979375_A1 | Down | -0.2288787157 |
| PubMed_21979375_A2 | Up | 0.7392543244 |
| GSE35957 | Up | 0.1835240218 |
| GSE36640 | Up | 0.7483941063 |
| GSE54402 | Down | -0.7377090075 |
| GSE9593 | Up | 0.4360984070 |
| GSE43922 | Down | -0.5696682971 |
| GSE24585 | Up | 0.0373751213 |
| GSE37065 | Down | -0.1751850786 |
| GSE28863_A1 | Up | 0.6108957966 |
| GSE28863_A2 | Up | 0.4668723835 |
| GSE28863_A3 | Up | 0.1924769427 |
| GSE28863_A4 | Down | -0.1487040405 |
| GSE48662 | Up | 0.8506844591 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005205 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016302 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT016838 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-484 | MIMAT0002174 | MIRT042089 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048994 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
