HCSGD entry for NTN3
1. General information
| Official gene symbol | NTN3 |
|---|---|
| Entrez ID | 4917 |
| Gene full name | netrin 3 |
| Other gene symbols | NTN2L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005102 | Receptor binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0005578 | Proteinaceous extracellular matrix | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0007411 | Axon guidance | NAS | biological_process |
| GO:0042692 | Muscle cell differentiation | TAS | biological_process |
| GO:0051149 | Positive regulation of muscle cell differentiation | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2600734471 | 0.8407990882 | 0.9532038290 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1110332399 |
| GSE13712_SHEAR | Up | 0.1661244910 |
| GSE13712_STATIC | Down | -0.0096798142 |
| GSE19018 | Up | 0.0612426279 |
| GSE19899_A1 | Down | -0.0052771310 |
| GSE19899_A2 | Down | -0.0606765813 |
| PubMed_21979375_A1 | Down | -0.1903240043 |
| PubMed_21979375_A2 | Down | -0.1906647533 |
| GSE35957 | Up | 0.0757485121 |
| GSE36640 | Up | 0.0064051448 |
| GSE54402 | Down | -0.0278506541 |
| GSE9593 | Up | 0.0464559898 |
| GSE43922 | Up | 0.0540550295 |
| GSE24585 | Up | 0.0970374520 |
| GSE37065 | Down | -0.0487799266 |
| GSE28863_A1 | Down | -0.0119911720 |
| GSE28863_A2 | Down | -0.0054810711 |
| GSE28863_A3 | Up | 0.4481264365 |
| GSE28863_A4 | Up | 0.1924342859 |
| GSE48662 | Up | 1.0377700191 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017587 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
