HCSGD entry for NOVA1
1. General information
| Official gene symbol | NOVA1 |
|---|---|
| Entrez ID | 4857 |
| Gene full name | neuro-oncological ventral antigen 1 |
| Other gene symbols | Nova-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000398 | MRNA splicing, via spliceosome | IEA | biological_process |
| GO:0003723 | RNA binding | IEA TAS | molecular_function |
| GO:0003729 | MRNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006396 | RNA processing | TAS | biological_process |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007626 | Locomotory behavior | TAS | biological_process |
| GO:0008380 | RNA splicing | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3664945709 | 0.2624437977 | 0.9999902473 | 0.9837344346 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0446883508 |
| GSE13712_SHEAR | Down | -0.3173236356 |
| GSE13712_STATIC | Down | -0.3613273970 |
| GSE19018 | Down | -0.1765769336 |
| GSE19899_A1 | Up | 0.0299681700 |
| GSE19899_A2 | Down | -0.4772303772 |
| PubMed_21979375_A1 | Down | -0.0079072468 |
| PubMed_21979375_A2 | Down | -0.0816899314 |
| GSE35957 | Down | -0.2916675768 |
| GSE36640 | Down | -0.6271156086 |
| GSE54402 | Up | 0.0191335681 |
| GSE9593 | Up | 0.1689380531 |
| GSE43922 | Down | -0.1226703521 |
| GSE24585 | Up | 1.3942257724 |
| GSE37065 | Up | 0.4418931991 |
| GSE28863_A1 | Up | 0.4047492261 |
| GSE28863_A2 | Up | 0.0149364142 |
| GSE28863_A3 | Up | 0.2361831985 |
| GSE28863_A4 | Down | -0.0195464259 |
| GSE48662 | Down | -0.0021002549 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-338-3p | MIMAT0000763 | MIRT003039 | qRT-PCR//Western blot | Functional MTI | 18684991 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018192 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020856 | Reporter assay;Other | Non-Functional MTI | 20584899 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
