HCSGD entry for ATP1B3
1. General information
| Official gene symbol | ATP1B3 |
|---|---|
| Entrez ID | 483 |
| Gene full name | ATPase, Na+/K+ transporting, beta 3 polypeptide |
| Other gene symbols | ATPB-3 CD298 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005391 | Sodium:potassium-exchanging ATPase activity | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0005890 | Sodium:potassium-exchanging ATPase complex | IEA | cellular_component |
| GO:0005901 | Caveola | IEA | cellular_component |
| GO:0006200 | ATP catabolic process | TAS | biological_process |
| GO:0006810 | Transport | TAS | biological_process |
| GO:0006813 | Potassium ion transport | IEA | biological_process |
| GO:0006814 | Sodium ion transport | IEA | biological_process |
| GO:0007596 | Blood coagulation | TAS | biological_process |
| GO:0008152 | Metabolic process | TAS | biological_process |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0035725 | Sodium ion transmembrane transport | TAS | biological_process |
| GO:0042470 | Melanosome | IEA | cellular_component |
| GO:0050900 | Leukocyte migration | TAS | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:0071805 | Potassium ion transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2305052886 | 0.5912484176 | 0.9140064025 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2552741297 |
| GSE13712_SHEAR | Down | -0.2064150705 |
| GSE13712_STATIC | Down | -0.1479266001 |
| GSE19018 | Down | -0.0115811696 |
| GSE19899_A1 | Up | 0.0245106538 |
| GSE19899_A2 | Up | 0.0677459676 |
| PubMed_21979375_A1 | Up | 0.6332016495 |
| PubMed_21979375_A2 | Down | -0.0958071617 |
| GSE35957 | Down | -0.1514075864 |
| GSE36640 | Up | 0.3905365487 |
| GSE54402 | Up | 0.2104169755 |
| GSE9593 | Up | 0.1930149331 |
| GSE43922 | Up | 0.2900614202 |
| GSE24585 | Up | 0.0400322670 |
| GSE37065 | Up | 0.6375864448 |
| GSE28863_A1 | Down | -0.4420327586 |
| GSE28863_A2 | Up | 0.2223123775 |
| GSE28863_A3 | Down | -0.4900131094 |
| GSE28863_A4 | Down | -0.1814077662 |
| GSE48662 | Down | -0.0177239726 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025733 | Microarray | Functional MTI (Weak) | 19073608 |
| hsa-miR-760 | MIMAT0004957 | MIRT036767 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045107 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048487 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
