HCSGD entry for NAGA
1. General information
| Official gene symbol | NAGA |
|---|---|
| Entrez ID | 4668 |
| Gene full name | N-acetylgalactosaminidase, alpha- |
| Other gene symbols | D22S674 GALB |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004557 | Alpha-galactosidase activity | IBA | molecular_function |
| GO:0005737 | Cytoplasm | IBA | cellular_component |
| GO:0005764 | Lysosome | IEA | cellular_component |
| GO:0008456 | Alpha-N-acetylgalactosaminidase activity | IDA | molecular_function |
| GO:0009311 | Oligosaccharide metabolic process | IBA | biological_process |
| GO:0016052 | Carbohydrate catabolic process | IDA | biological_process |
| GO:0016139 | Glycoside catabolic process | IBA | biological_process |
| GO:0019377 | Glycolipid catabolic process | IMP | biological_process |
| GO:0042803 | Protein homodimerization activity | IPI | molecular_function |
| GO:0046477 | Glycosylceramide catabolic process | IBA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9078630865 | 0.0066547282 | 0.9999902473 | 0.1641603561 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3671989609 |
| GSE13712_SHEAR | Down | -0.7267474297 |
| GSE13712_STATIC | Down | -0.3368157243 |
| GSE19018 | Up | 0.5759418138 |
| GSE19899_A1 | Down | -0.6332859271 |
| GSE19899_A2 | Down | -0.8901820851 |
| PubMed_21979375_A1 | Down | -0.3639743991 |
| PubMed_21979375_A2 | Down | -1.2031549144 |
| GSE35957 | Down | -1.0889493682 |
| GSE36640 | Up | 0.0646181190 |
| GSE54402 | Down | -0.5235526590 |
| GSE9593 | Down | -0.0376693235 |
| GSE43922 | Down | -0.6933579317 |
| GSE24585 | Up | 0.2000904046 |
| GSE37065 | Down | -0.1769317096 |
| GSE28863_A1 | Up | 0.4453535122 |
| GSE28863_A2 | Up | 0.3589546553 |
| GSE28863_A3 | Down | -0.9641796719 |
| GSE28863_A4 | Up | 0.0412952049 |
| GSE48662 | Down | -0.1626145639 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Glycerol | DB04077 | EXPT01027 |
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016604 | Microarray | Functional MTI (Weak) | 20304954 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043313 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
