HCSGD entry for MSI1
1. General information
| Official gene symbol | MSI1 |
|---|---|
| Entrez ID | 4440 |
| Gene full name | musashi RNA-binding protein 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | TAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005844 | Polysome | IEA | cellular_component |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0008266 | Poly(U) RNA binding | IEA | molecular_function |
| GO:0009725 | Response to hormone | IEA | biological_process |
| GO:0030855 | Epithelial cell differentiation | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6255333004 | 0.4126839976 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0641310628 |
| GSE13712_SHEAR | Up | 0.0674221998 |
| GSE13712_STATIC | Down | -0.1472635171 |
| GSE19018 | Up | 0.1479566767 |
| GSE19899_A1 | Down | -0.0031999294 |
| GSE19899_A2 | Up | 0.3818575494 |
| PubMed_21979375_A1 | Up | 0.0793458272 |
| PubMed_21979375_A2 | Up | 0.4100609291 |
| GSE35957 | Down | -0.2196794876 |
| GSE36640 | Down | -0.0347318485 |
| GSE54402 | Down | -0.0725012729 |
| GSE9593 | Down | -0.2218831439 |
| GSE43922 | Up | 0.0879844702 |
| GSE24585 | Down | -0.3817533193 |
| GSE37065 | Down | -0.1326881128 |
| GSE28863_A1 | Down | -0.2689809084 |
| GSE28863_A2 | Down | -0.2269297987 |
| GSE28863_A3 | Up | 0.3247068569 |
| GSE28863_A4 | Up | 0.1748540934 |
| GSE48662 | Up | 0.1864716820 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-197-3p | MIMAT0000227 | MIRT048066 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052295 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
