HCSGD entry for MGAT5
1. General information
| Official gene symbol | MGAT5 |
|---|---|
| Entrez ID | 4249 |
| Gene full name | mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase |
| Other gene symbols | GNT-V GNT-VA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0030144 | Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity | NAS | molecular_function |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5047115459 | 0.0441710763 | 0.9999902473 | 0.3951824949 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0637361150 |
| GSE13712_SHEAR | Down | -0.1625075919 |
| GSE13712_STATIC | Up | 0.2291188753 |
| GSE19018 | Up | 0.1091897106 |
| GSE19899_A1 | Down | -0.5339307739 |
| GSE19899_A2 | Down | -0.0896538320 |
| PubMed_21979375_A1 | Down | -1.4531542476 |
| PubMed_21979375_A2 | Down | -0.0563875056 |
| GSE35957 | Down | -0.1544233996 |
| GSE36640 | Up | 1.0344172839 |
| GSE54402 | Down | -0.8565209047 |
| GSE9593 | Up | 0.1952683448 |
| GSE43922 | Down | -0.0392024801 |
| GSE24585 | Down | -0.1432390221 |
| GSE37065 | Down | -0.0979234515 |
| GSE28863_A1 | Down | -0.5675512591 |
| GSE28863_A2 | Up | 0.9807082009 |
| GSE28863_A3 | Down | -0.7045701552 |
| GSE28863_A4 | Down | -0.1227815222 |
| GSE48662 | Up | 0.4999303895 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-502-3p | MIMAT0004775 | MIRT037984 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-769-5p | MIMAT0003886 | MIRT039157 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT047339 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
