HCSGD entry for MGAT3
1. General information
| Official gene symbol | MGAT3 |
|---|---|
| Entrez ID | 4248 |
| Gene full name | mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase |
| Other gene symbols | GNT-III GNT3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0003830 | Beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | IEA | molecular_function |
| GO:0006487 | Protein N-linked glycosylation | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0018279 | Protein N-linked glycosylation via asparagine | TAS | biological_process |
| GO:0043687 | Post-translational protein modification | TAS | biological_process |
| GO:0044267 | Cellular protein metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3340743893 | 0.8871818168 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0110930617 |
| GSE13712_SHEAR | Up | 0.0603280666 |
| GSE13712_STATIC | Up | 0.0198191214 |
| GSE19018 | Up | 0.3062911994 |
| GSE19899_A1 | Down | -0.0819498877 |
| GSE19899_A2 | Up | 0.0555336698 |
| PubMed_21979375_A1 | Down | -0.0469837789 |
| PubMed_21979375_A2 | Up | 0.0026992671 |
| GSE35957 | Up | 0.1063354045 |
| GSE36640 | Up | 0.2632206219 |
| GSE54402 | Up | 0.0646646741 |
| GSE9593 | Up | 0.0394454550 |
| GSE43922 | Up | 0.0510789002 |
| GSE24585 | Up | 0.0794535044 |
| GSE37065 | Down | -0.0536557525 |
| GSE28863_A1 | Down | -0.4270390430 |
| GSE28863_A2 | Down | -0.1240593880 |
| GSE28863_A3 | Up | 0.5103844833 |
| GSE28863_A4 | Up | 0.2526529219 |
| GSE48662 | Up | 0.0907637819 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018035 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
