HCSGD entry for ARVCF
1. General information
| Official gene symbol | ARVCF |
|---|---|
| Entrez ID | 421 |
| Gene full name | armadillo repeat gene deleted in velocardiofacial syndrome |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | TAS | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016339 | Calcium-dependent cell-cell adhesion | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4879522663 | 0.7033807834 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0517834164 |
| GSE13712_SHEAR | Up | 0.2031988895 |
| GSE13712_STATIC | Up | 0.0725306600 |
| GSE19018 | Down | -0.0554034311 |
| GSE19899_A1 | Down | -0.1523760324 |
| GSE19899_A2 | Up | 0.1677061816 |
| PubMed_21979375_A1 | Down | -0.0211757474 |
| PubMed_21979375_A2 | Up | 0.0531725976 |
| GSE35957 | Down | -0.1279479302 |
| GSE36640 | Up | 0.1283410877 |
| GSE54402 | Up | 0.1725584629 |
| GSE9593 | Down | -0.0489826233 |
| GSE43922 | Up | 0.0538824464 |
| GSE24585 | Down | -0.2201925893 |
| GSE37065 | Down | -0.0637715051 |
| GSE28863_A1 | Down | -0.1213883648 |
| GSE28863_A2 | Down | -0.1575044042 |
| GSE28863_A3 | Up | 0.2518369268 |
| GSE28863_A4 | Up | 0.0896692494 |
| GSE48662 | Up | 0.7723473201 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050721 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
